Parse Biosciences Experimental Report

Sample: nuclei_tissue Wells: A5-A6

Estimated Number of Cells	2,078
Median Transcripts/Cell	10,398
Median Genes/Cell	4,046
Mean Reads/Cell	63,104
Number of Reads	131,130,681
Sequencing Saturation	0.511
BC1 (RT) >Q30	0.956
BC2 >Q30	0.967
BC3 >Q30	0.980
cDNA >Q30	0.957

Plates

Parse Biosciences - WT Mini v2, Pipeline v1.0.3p

Cluster	Gene name	Score	Log2 FC	Pval adj
1	LINC01337	11.3	2.3	1.0E+00
1	ENSG00000290829	8.4	2.0	1.0E+00
1	ENSG00000276292	7.8	2.4	1.0E+00
1	ESCO2	7.3	2.1	2.8E-40
1	FANCD2OS	7.0	1.9	1.0E+00
1	RPL23AP20	6.7	2.9	1.0E+00
1	SLC7A3	6.7	1.8	1.0E+00
1	SHISA8	6.4	2.1	1.0E+00
1	TCF19	5.8	1.8	3.6E-02
1	PKMYT1	5.7	1.8	6.8E-07
1	ZNF849P	5.7	1.7	1.0E+00
1	LIM2-AS1	5.7	1.8	1.0E+00
1	ENSG00000287016	5.6	1.8	1.0E+00
1	ENSG00000285730	5.6	1.6	1.0E+00
1	ENSG00000261823	5.5	2.4	1.0E+00
1	H2BC7	5.5	1.8	1.0E+00
1	ASF1B	5.4	1.8	2.4E-09
1	ENSG00000250962	5.3	1.6	1.0E+00
1	RAD54L	5.3	1.8	6.9E-30
1	ENSG00000286604	5.2	2.5	1.0E+00
2	ENSG00000286707	6.7	2.1	1.0E+00
2	ENSG00000273214	5.2	1.9	1.0E+00
2	ENSG00000287248	5.1	2.1	1.0E+00
2	ALKAL1	4.7	2.0	1.0E+00
2	ENSG00000177359	4.7	1.9	1.0E+00
2	MTFR2P2	4.7	2.2	1.0E+00
2	PCBP3-AS1	4.6	2.2	1.0E+00
2	WDR87BP	4.1	2.0	1.0E+00
2	GARIN2	3.9	1.6	1.0E+00
2	GZMM	3.9	1.7	1.0E+00
2	AZU1	3.9	1.9	1.0E+00
2	ENSG00000275139	3.8	1.6	1.0E+00
2	ENSG00000286886	3.7	1.7	1.0E+00
2	PKD1-AS1	3.7	2.0	1.0E+00
2	ARG1	3.6	2.0	1.0E+00
2	ENSG00000286082	3.5	1.6	1.0E+00
2	ENSG00000247372	3.5	1.9	1.0E+00
2	DPY19L2P4	3.4	1.5	1.0E+00
2	ENSG00000264924	3.4	1.9	1.0E+00
2	UBL4A	3.4	2.6	1.0E+00
3	GATA3	15.8	2.7	1.0E+00
3	SLC17A6	12.5	2.7	1.0E+00
3	CPSF1P1	10.1	2.6	1.0E+00
3	PINCR	10.0	2.0	1.0E+00
3	ENSG00000285569	9.6	2.7	1.0E+00
3	ENSG00000289150	9.5	2.4	1.0E+00
3	LMX1B-DT	9.4	2.2	1.0E+00
3	LINC02885	8.8	1.9	1.0E+00
3	PRCD	8.8	1.9	1.0E+00
3	MIR217HG	8.8	2.0	7.6E-08
3	ENSG00000260398	8.5	1.8	1.0E+00
3	LINC00581	8.4	2.6	1.0E+00
3	ST18	8.1	2.2	1.0E+00
3	ENSG00000250064	8.1	1.7	1.0E+00
3	NYAP2	7.9	2.0	1.0E+00
3	ENSG00000250137	7.9	1.9	1.0E+00
3	ENSG00000234275	7.7	2.0	1.0E+00
3	ENSG00000267277	7.7	2.2	1.0E+00
3	ENSG00000259280	7.7	1.7	1.0E+00
3	SULT4A1	7.6	1.9	1.0E+00
4	ITIH6	14.9	2.9	1.0E+00
4	NAMA	12.3	2.6	1.0E+00
4	MAGEC3	11.3	2.4	1.0E+00
4	DIPK1C	11.1	2.5	1.0E+00
4	ENSG00000291246	10.1	2.6	1.0E+00
4	ENSG00000224016	9.7	2.5	1.0E+00
4	EXTL1	9.6	2.5	1.0E+00
4	SLC18A1	9.4	2.4	1.0E+00
4	MRO	9.2	2.2	1.0E+00
4	LINC01954	9.1	2.2	1.0E+00
4	F5	8.9	2.4	1.0E+00
4	ENSG00000286542	8.9	2.5	1.0E+00
4	ENSG00000233223	8.2	2.1	1.0E+00
4	ELFN2	8.1	2.3	1.0E+00
4	ENSG00000287693	7.8	2.2	1.0E+00
4	ENSG00000224569	7.8	2.5	1.0E+00
4	CAMK2A	7.8	2.3	1.0E+00
4	ENSG00000255442	7.7	2.2	1.0E+00
4	LINC01945	7.5	2.3	1.0E+00
4	ENSG00000276128	7.5	2.1	1.0E+00
5	DMBX1	28.1	3.6	1.0E+00
5	HSPB1	27.7	3.7	1.0E+00
5	NXPH4	27.6	3.5	1.0E+00
5	ENSG00000253633	23.7	3.6	1.0E+00
5	ADM	23.5	3.3	6.4E-01
5	ANKRD37	20.9	3.1	1.0E+00
5	BHLHE41	20.3	3.1	5.7E-03
5	BAIAP3	20.1	3.0	1.0E+00
5	PDE4C	19.6	3.0	1.0E+00
5	ENSG00000224658	19.0	3.2	1.0E+00
5	ENSG00000276991	16.9	3.4	1.0E+00
5	CYP46A1	16.9	3.2	1.3E-03
5	ENSG00000291149	16.4	2.9	1.6E-01
5	ENSG00000286973	14.6	2.8	1.0E+00
5	HSP90AA2P	13.9	2.8	1.0E+00
5	ADAM20P1	13.7	2.6	1.0E+00
5	ENSG00000250149	13.4	2.7	1.0E+00
5	HSPA1A	12.7	2.8	1.0E+00
5	GABRA5	12.5	2.7	1.0E+00
5	CIART	12.4	2.9	2.1E-01
6	REEP4	40.9	3.2	9.8E-01
6	FAM72A	40.2	3.7	1.0E+00
6	CDC20	34.6	3.3	2.4E-05
6	ENSG00000259732	30.7	3.3	1.2E-11
6	KIF20A	30.7	3.5	4.2E-45
6	UBE2C	26.3	3.2	8.1E-28
6	CCNB1	25.8	3.4	1.5E-64
6	PTTG1	25.3	3.2	2.0E-33
6	ENSG00000254687	24.0	4.2	1.0E+00
6	AURKA	23.0	3.1	2.4E-43
6	PIF1	22.3	3.4	9.7E-76
6	ENSG00000289357	22.0	2.8	1.0E+00
6	CDCA3	21.8	3.0	5.4E-14
6	PSRC1	21.6	2.7	8.1E-09
6	FAM110A	21.4	2.9	1.7E-09
6	NMU	21.1	2.9	4.6E-15
6	PLK1	20.5	3.0	1.9E-32
6	TNFAIP8L1	18.5	2.6	6.9E-05
6	FAM72D	18.4	2.5	1.0E+00
6	ENSG00000280228	18.2	2.4	1.0E+00
7	KRT19	74.8	4.2	1.6E-03
7	EPPK1	54.5	4.6	1.0E+00
7	MUC4	54.3	4.0	4.0E-03
7	OTX2	53.4	4.1	2.1E-08
7	KRT7	52.7	3.8	1.0E+00
7	ST8SIA6-AS1	51.8	4.0	3.5E-04
7	GLYATL3	50.6	4.0	1.0E+00
7	PLCH2	47.2	3.8	1.0E+00
7	SH3RF2	46.4	3.8	2.4E-02
7	MARVELD2	45.9	3.6	1.0E+00
7	FAM83F	44.2	4.2	1.0E+00
7	CYP2W1	41.8	3.7	8.7E-04
7	NTF3	41.1	3.7	1.9E-01
7	SULT1E1	40.4	3.9	2.7E-02
7	LAD1	39.5	4.6	1.0E+00
7	DLK1	38.7	3.6	3.3E-03
7	CABCOCO1	38.6	3.5	1.0E+00
7	LAMB3	38.0	3.6	7.1E-01
7	LINC00958	37.8	3.5	1.0E+00
7	OC90	37.3	4.0	1.0E+00
8	ROBO4	417.1	6.9	2.2E-16
8	ENSG00000234626	396.0	6.5	2.5E-16
8	DIPK2B	392.5	6.5	2.7E-16
8	CDH5	357.6	5.8	7.5E-17
8	EGFL7	355.0	6.4	2.2E-13
8	ZFP36	319.8	5.5	4.2E-31
8	IL4R	314.5	5.7	2.5E-32
8	TIE1	308.8	6.5	1.5E-09
8	CD34	304.8	5.9	2.8E-11
8	ENSG00000286508	303.6	7.7	2.4E-06
8	ADGRF5	298.3	6.2	1.4E-26
8	CD93	291.9	5.9	5.8E-21
8	NOS3	289.5	5.8	1.3E-10
8	GGT5	283.9	5.8	4.6E-10
8	ESM1	280.1	5.9	1.4E-10
8	ADCY4	275.8	6.0	6.6E-09
8	KDR	271.2	5.6	2.3E-18
8	ENSG00000250863	269.3	6.2	9.1E-08
8	CLEC1A	268.0	6.0	2.6E-08
8	EXOC3L1	262.7	6.5	9.2E-07
9	ENSG00000286541	117.1	4.9	3.2E-05
9	ENSG00000289996	96.6	5.3	1.0E+00
9	FGF10	93.7	4.8	1.0E+00
9	ENSG00000250775	82.2	4.9	1.0E+00
9	LINC01894	80.9	4.8	1.0E+00
9	RERGL	71.2	4.6	1.3E-02
9	ENSG00000254366	63.2	4.5	4.7E-11
9	LINC00377	60.7	4.3	1.0E+00
9	ENSG00000237473	60.6	4.4	5.2E-13
9	ADGRF1	59.1	4.2	1.0E+00
9	ENSG00000249837	58.3	4.1	1.0E+00
9	ENSG00000197462	56.6	4.5	1.0E+00
9	ENSG00000291212	56.3	4.2	1.6E-01
9	IGSF10	54.9	4.5	1.1E-09
9	MYH8	51.6	4.1	1.0E+00
9	CLDN10-AS1	50.4	4.0	1.0E+00
9	DNM3OS	49.7	4.3	9.2E-13
9	METTL24	47.9	4.1	1.6E-09
9	HORMAD1	46.7	4.1	6.6E-01
9	WIF1	46.5	4.2	8.8E-02
10	MIR137HG	83.7	4.4	1.0E+00
10	TRPC4	82.0	4.6	1.9E-04
10	ENSG00000287867	61.1	5.4	1.0E+00
10	CNTN6	57.8	4.5	7.1E-05
10	ENSG00000286364	48.8	4.0	1.0E+00
10	LINC01921	40.9	3.6	1.0E+00
10	SERPINF2	37.2	4.1	1.0E+00
10	ENSG00000260249	35.1	3.5	1.0E+00
10	MIR497HG	34.8	3.8	1.0E+00
10	ENSG00000225588	32.5	3.6	1.0E+00
10	HSPD1P4	32.4	3.6	1.0E+00
10	NPAS4	31.2	3.4	1.0E+00
10	ENSG00000286778	30.8	4.5	1.0E+00
10	NYAP2	30.4	3.4	1.0E+00
10	DIRAS2	28.8	3.1	1.0E+00
10	ENSG00000258052	28.4	3.1	1.0E+00
10	LINC01163	28.1	3.5	1.4E-01
10	TTN-AS1	27.7	3.7	1.6E-09
10	LINC01609	27.7	4.1	1.0E+00
10	ENSG00000286799	27.4	4.0	1.0E+00
11	LINC02096	187.8	5.5	7.9E-02
11	MAP7D2	172.4	5.5	4.9E-06
11	TMBIM7P	137.9	6.2	1.0E+00
11	TKTL1	133.6	5.1	1.0E+00
11	FER1L6	130.8	4.8	1.0E+00
11	GBX1	126.0	4.8	1.0E+00
11	LINC01949	125.4	5.6	1.0E+00
11	LINC02150	121.6	5.1	8.7E-02
11	SNX31	118.5	5.1	1.8E-02
11	GRM3-AS1	113.3	5.1	1.0E+00
11	ENSG00000285744	112.3	4.9	3.9E-01
11	ENSG00000248969	111.3	5.0	1.0E+00
11	ITGAM	108.6	4.7	1.0E+00
11	TAC3	107.8	4.9	1.0E+00
11	ENSG00000289689	106.8	4.8	1.0E+00
11	TRIM72	104.8	4.8	1.0E+00
11	ENSG00000253796	103.9	4.5	1.0E+00
11	ENSG00000237626	101.9	4.7	1.0E+00
11	ENSG00000265399	100.7	6.0	1.0E+00
11	RND1	97.6	4.5	1.0E+00
12	CLEC7A	840.8	8.4	2.6E-06
12	RGS1	792.0	7.9	2.5E-06
12	THEMIS2	777.8	7.8	2.6E-06
12	CD163	683.6	7.5	4.8E-05
12	PIK3R5	664.5	7.3	4.9E-05
12	CD86	664.1	8.1	6.9E-04
12	MS4A7	653.2	9.0	7.5E-03
12	PTPRC	649.1	7.2	2.7E-06
12	MS4A6E	646.8	7.5	2.5E-06
12	CD300A	625.0	7.6	7.1E-04
12	CCL3	600.6	8.3	7.6E-03
12	MS4A4E	599.5	7.3	7.3E-04
12	CD53	585.5	7.2	7.5E-04
12	MS4A4A	583.7	7.1	7.3E-04
12	HLA-DRB1	578.7	8.0	7.7E-03
12	LAPTM5	577.6	7.1	7.3E-04
12	IL1B	567.7	8.9	6.4E-02
12	SAMSN1	566.5	6.9	5.2E-05
12	LNCAROD	555.1	7.5	2.4E-06
12	CD74	545.9	7.0	4.9E-05